C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393409 PLXNA1-001 ENSG00000114554 9606 + 3:126988594-127037392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000393409
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000393409 2.586±0.00 3.687±0.00 1.053±0.00 2.886±0.28 3.819±2.52 1.371±0.28 3.380±2.93 1.047±0.94 0.901±0.50 2.311±1.00 2.124±0.78 4.515±2.23 6.635±1.73 3.014±1.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002116 TAS semaphorin receptor complex
GO:0004872 TAS:IEA receptor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005886 TAS plasma membrane
GO:0007165 IEA signal transduction
GO:0007275 TAS:IEA multicellular organismal development
GO:0007411 TAS axon guidance
GO:0014910 IEA regulation of smooth muscle cell migration
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0017154 TAS semaphorin receptor activity
GO:0060666 IEA dichotomous subdivision of terminal units involved in salivary gland branching
GO:0070062 IDA extracellular vesicular exosome
GO:0071526 IEA semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163139 Plxna1-202 protein_coding Mus_musculus 0 6704
ENSMUST00000049845 Plxna1-201 protein_coding Mus_musculus 0 6700
ENSDART00000086317 plxna1-201 protein_coding Danio_rerio 0 1825
ENSDART00000109152 protein_coding Danio_rerio 0 1786
ENSMUST00000004326 Plxna3-001 protein_coding Mus_musculus 0 1419
ENSMUST00000115096 Plxna4-001 protein_coding Mus_musculus 0 1334
ENSDART00000079699 plxna3-201 protein_coding Danio_rerio 0 1317
ENSDART00000044000 plxna3-001 protein_coding Danio_rerio 0 1317
ENSMUST00000154062 Plxna3-002 retained_intron Mus_musculus 0 1301
ENSDART00000016230 plxna4-001 protein_coding Danio_rerio 0 1026
ENSMUST00000152317 Plxna3-007 retained_intron Mus_musculus 0 424
ENSMUST00000137484 Plxna3-009 retained_intron Mus_musculus 0 196

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