C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zic family member 5 (odd-paired homolog, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000022204 zic5-001 ENSDARG00000016022 7955 - 9:32307416-32311356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000022204
Transcript ID Brain Kidney Liver Muscle
ENSDART00000022204 57.061±13.20 0.903±0.06 0.061±0.00 1.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FV CIL_0004FV_0001 CGP 9:32201019-32347632
CIL_0007LI CIL_0007LI_0003 UCNEbase 9:32223724-32524953
CIL_0004FW CIL_0004FW_0001 CGP 9:32307416-32347632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001841 IGI neural tube formation
GO:0003676 IEA nucleic acid binding
GO:0030901 IMP midbrain development
GO:0033278 IMP cell proliferation in midbrain
GO:0042127 IMP regulation of cell proliferation
GO:0046872 IEA metal ion binding
GO:0060070 IMP canonical Wnt receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075888 Zic2-001 protein_coding Mus_musculus 0 388
ENSMUST00000088627 Zic3-001 protein_coding Mus_musculus 0 313
ENSMUST00000088629 Zic3-003 protein_coding Mus_musculus 0 303
ENSMUST00000088631 Zic3-002 protein_coding Mus_musculus 0 313
ENST00000221665 FIZ1-001 protein_coding Homo_sapiens 0.00005 55
ENST00000267294 ZIC5-001 protein_coding Homo_sapiens 0.00000000000003 86

Loading