C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein of the cerebellum 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088631 Zic3-002 ENSMUSG00000067860 10090 + X:58030999-58036559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverOvaryPlacentaTestisENSMUST00000088631
Transcript ID Brain Breast Liver Ovary Placenta Testis
ENSMUST00000088631 0.291±0.00 0.029±0.00 0.011±0.01 0.039±0.03 0.472±0.45 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PM CIL_0000PM_0003 CGP X:57496668-58041736
CIL_0007NT CIL_0007NT_0002 UCNEbase X:57709462-58446094

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001947 IMP heart looping
GO:0007368 IMP determination of left/right symmetry
GO:0007389 IMP pattern specification process
GO:0009952 IGI anterior/posterior pattern specification
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000022204 zic5-001 protein_coding Danio_rerio 0 313
ENST00000282928 ZIC1-001 protein_coding Homo_sapiens 0 438
ENST00000287538 ZIC3-003 protein_coding Homo_sapiens 0 2641
ENST00000370606 ZIC3-001 protein_coding Homo_sapiens 0 887
ENST00000478471 ZIC3-002 processed_transcript Homo_sapiens 0 470
ENST00000488404 ZIC1-002 protein_coding Homo_sapiens 1e-38 163

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