C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycine receptor, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000047680 glra1-202 ENSDARG00000012019 7955 + 14:26827181-26914777 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000047680
Transcript ID Brain
ENSDART00000047680 1.308±1.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075603 Glra1-003 protein_coding Mus_musculus 0 736
ENSMUST00000102716 Glra1-002 protein_coding Mus_musculus 0 809
ENSMUST00000108853 Glra1-001 protein_coding Mus_musculus 0 806
ENST00000264428 GLRB-001 protein_coding Homo_sapiens 9e-23 113
ENST00000274576 GLRA1-001 protein_coding Homo_sapiens 0 821
ENST00000455880 GLRA1-004 protein_coding Homo_sapiens 0 739
ENST00000462581 GLRA1-002 nonsense_mediated_decay Homo_sapiens 0 817
ENST00000471351 GLRA1-003 processed_transcript Homo_sapiens 0 640
ENST00000506411 GLRB-003 nonsense_mediated_decay Homo_sapiens 2e-23 113
ENST00000509282 GLRB-002 protein_coding Homo_sapiens 5e-23 113
ENST00000515642 GLRB-004 nonsense_mediated_decay Homo_sapiens 2e-22 110
ENST00000541722 GLRB-201 protein_coding Homo_sapiens 8e-23 113

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