C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycine receptor, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471351 GLRA1-003 ENSG00000145888 9606 - 5:151849691-151924832 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverTestisENST00000471351
Transcript ID Brain Breast Colon Heart Kidney Liver Testis
ENST00000471351 0.105±0.00 0.064±0.00 0.009±0.00 0.017±0.00 0.010±0.00 0.057±0.00 0.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U9 CIL_0001U9_0001 CGP 5:151771045-151924842
CIL_0001UA CIL_0001UA_0001 CGP 5:151822513-152433368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102716 Glra1-002 protein_coding Mus_musculus 0 1369
ENSMUST00000075603 Glra1-003 protein_coding Mus_musculus 0 1304
ENSMUST00000108853 Glra1-001 protein_coding Mus_musculus 0 987
ENSDART00000005499 glra1-201 protein_coding Danio_rerio 0 695
ENSDART00000066197 glra1-203 protein_coding Danio_rerio 0 640
ENSDART00000047680 glra1-202 protein_coding Danio_rerio 0 640
ENSDART00000136733 glra1-001 protein_coding Danio_rerio 0 640
ENSDART00000030509 glra4a-202 protein_coding Danio_rerio 0 630
ENSDART00000026194 glra4a-201 protein_coding Danio_rerio 0 630
ENSDART00000146445 glra4a-001 protein_coding Danio_rerio 0 630
ENSDART00000006474 glra4b-001 protein_coding Danio_rerio 0 597
ENSMUST00000086199 Glul-001 protein_coding Mus_musculus 0 451
ENSMUST00000120291 Glns-ps1-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000139476 Glul-005 protein_coding Mus_musculus 0 420
ENSDART00000009777 GLRA3-201 protein_coding Danio_rerio 0 387
ENSMUST00000153134 Glul-003 processed_transcript Mus_musculus 0 303
ENSMUST00000154576 Glul-004 retained_intron Mus_musculus 0 287
ENSDART00000131947 glra4a-002 processed_transcript Danio_rerio 0 259

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