C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycine receptor, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462581 GLRA1-002 ENSG00000145888 9606 - 5:151822627-151924836 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartMuscleOvaryTestisENST00000462581
Transcript ID Bladder Brain Heart Muscle Ovary Testis
ENST00000462581 0.085±0.00 0.062±0.00 0.059±0.00 0.818±0.00 0.061±0.00 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001U9 CIL_0001U9_0001 CGP 5:151771045-151924842
CIL_0001UA CIL_0001UA_0001 CGP 5:151822513-152433368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108853 Glra1-001 protein_coding Mus_musculus 0 1650
ENSMUST00000102716 Glra1-002 protein_coding Mus_musculus 0 1561
ENSMUST00000075603 Glra1-003 protein_coding Mus_musculus 0 1461
ENSDART00000005499 glra1-201 protein_coding Danio_rerio 0 817
ENSDART00000066197 glra1-203 protein_coding Danio_rerio 0 817
ENSDART00000047680 glra1-202 protein_coding Danio_rerio 0 817
ENSDART00000136733 glra1-001 protein_coding Danio_rerio 0 817
ENSDART00000030509 glra4a-202 protein_coding Danio_rerio 0 623
ENSDART00000026194 glra4a-201 protein_coding Danio_rerio 0 623
ENSDART00000146445 glra4a-001 protein_coding Danio_rerio 0 623
ENSDART00000006474 glra4b-001 protein_coding Danio_rerio 0 610
ENSDART00000009777 GLRA3-201 protein_coding Danio_rerio 0 484
ENSDART00000131947 glra4a-002 processed_transcript Danio_rerio 0 322

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