C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger E-box binding homeobox 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000047724 zeb1b-001 ENSDARG00000013207 7955 - 12:28321305-28422757 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000047724
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000047724 11.510±0.83 13.335±2.50 4.338±1.45 0.629±0.00 4.013±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007369 IMP gastrulation
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025081 Zeb1-001 protein_coding Mus_musculus 0 339
ENSMUST00000159390 Zeb1-008 protein_coding Mus_musculus 0 267
ENSMUST00000160522 Zeb1-002 retained_intron Mus_musculus 1e-29 135
ENSMUST00000161295 Zeb1-007 nonsense_mediated_decay Mus_musculus 0 339
ENSMUST00000162892 Zeb1-009 retained_intron Mus_musculus 0 339
ENSMUST00000175925 Zeb1-010 nonsense_mediated_decay Mus_musculus 0 339
ENSMUST00000177030 Zeb1-003 processed_transcript Mus_musculus 0 265
ENST00000320985 ZEB1-018 protein_coding Homo_sapiens 6e-37 161
ENST00000361642 ZEB1-201 protein_coding Homo_sapiens 6e-37 161
ENST00000424869 ZEB1-004 protein_coding Homo_sapiens 9e-23 111
ENST00000437844 ZEB1-001 nonsense_mediated_decay Homo_sapiens 7e-37 161
ENST00000446923 ZEB1-202 protein_coding Homo_sapiens 7e-37 161
ENST00000488625 ZEB1-005 retained_intron Homo_sapiens 6e-37 161
ENST00000542815 ZEB1-016 protein_coding Homo_sapiens 7e-19 100
ENST00000558440 ZEB1-003 protein_coding Homo_sapiens 2e-24 117
ENST00000559858 ZEB1-015 processed_transcript Homo_sapiens 8e-23 113
ENST00000560721 ZEB1-002 protein_coding Homo_sapiens 2e-24 119

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