C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger E-box binding homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488625 ZEB1-005 ENSG00000148516 9606 + 10:31318495-31529202 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLungMuscleOvaryTestisENST00000488625
Transcript ID Breast Heart Kidney Lung Muscle Ovary Testis
ENST00000488625 1.385±0.00 1.365±0.00 0.654±0.00 2.733±0.00 0.365±0.00 0.372±0.00 1.734±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R6 CIL_0000R6_0001 CGP 10:30820207-31529814
CIL_0000R1 CIL_0000R1_0001 CGP 10:31318495-31928876

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025081 Zeb1-001 protein_coding Mus_musculus 0 3155
ENSMUST00000177030 Zeb1-003 processed_transcript Mus_musculus 0 2303
ENSMUST00000162892 Zeb1-009 retained_intron Mus_musculus 0 2132
ENSMUST00000175925 Zeb1-010 nonsense_mediated_decay Mus_musculus 0 1639
ENSMUST00000161295 Zeb1-007 nonsense_mediated_decay Mus_musculus 0 1016
ENSMUST00000159390 Zeb1-008 protein_coding Mus_musculus 0 802
ENSMUST00000177070 Zeb1-011 processed_transcript Mus_musculus 0 758
ENSMUST00000160910 Zeb1-006 protein_coding Mus_musculus 0 292
ENSDART00000047724 zeb1b-001 protein_coding Danio_rerio 6e-37 161
ENSMUST00000159477 Zeb1-005 processed_transcript Mus_musculus 1e-33 150
ENSDART00000136077 zeb1a-003 protein_coding Danio_rerio 0.0000007 62
ENSDART00000146493 zeb1a-001 protein_coding Danio_rerio 0.0000007 62

Loading