C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger E-box binding homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424869 ZEB1-004 ENSG00000148516 9606 + 10:31319216-31520200 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungENST00000424869
Transcript ID Breast Colon Heart Liver Lung
ENST00000424869 9.045±0.00 10.238±0.00 7.016±0.00 21.203±0.00 10.281±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R6 CIL_0000R6_0001 CGP 10:30820207-31529814
CIL_0000R1 CIL_0000R1_0001 CGP 10:31318495-31928876

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175925 Zeb1-010 nonsense_mediated_decay Mus_musculus 0 963
ENSMUST00000162892 Zeb1-009 retained_intron Mus_musculus 0 651
ENSMUST00000161295 Zeb1-007 nonsense_mediated_decay Mus_musculus 0 651
ENSMUST00000025081 Zeb1-001 protein_coding Mus_musculus 0 651
ENSMUST00000177070 Zeb1-011 processed_transcript Mus_musculus 0 606
ENSMUST00000177030 Zeb1-003 processed_transcript Mus_musculus 0 538
ENSMUST00000159390 Zeb1-008 protein_coding Mus_musculus 0 479
ENSMUST00000160522 Zeb1-002 retained_intron Mus_musculus 0 368
ENSMUST00000160910 Zeb1-006 protein_coding Mus_musculus 0 292
ENSDART00000047724 zeb1b-001 protein_coding Danio_rerio 9e-23 111
ENSDART00000146493 zeb1a-001 protein_coding Danio_rerio 0.00000000004 73
ENSDART00000136077 zeb1a-003 protein_coding Danio_rerio 0.00000009 62

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