C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: early B-cell factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000085381 ebf3-001 ENSDARG00000016300 7955 - 12:44139598-44282750 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000085381
Transcript ID Brain Heart Kidney
ENSDART00000085381 12.247±5.53 1.181±0.18 0.497±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OP CIL_0007OP_0003 UCNEbase 12:44002554-44287411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0046872 IEA metal ion binding
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033378 Ebf3-201 protein_coding Mus_musculus 0 1356
ENSMUST00000106118 Ebf3-202 protein_coding Mus_musculus 0 1168
ENSMUST00000168203 Ebf3-203 protein_coding Mus_musculus 0 1258
ENSMUST00000169486 Ebf3-204 protein_coding Mus_musculus 0 1258
ENST00000355311 EBF3-001 protein_coding Homo_sapiens 0 431
ENST00000368648 EBF3-002 protein_coding Homo_sapiens 0 431
ENST00000408929 EBF2-002 protein_coding Homo_sapiens 0 553
ENST00000520164 EBF2-001 protein_coding Homo_sapiens 0 688

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