C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor I/Xb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000090235 nfixb-202 ENSDARG00000061836 7955 + 3:14373057-14663156 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000090235
Transcript ID Brain Heart Kidney Liver
ENSDART00000090235 28.772±0.00 0.283±0.06 2.673±0.77 0.754±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007179 IEA transforming growth factor beta receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076715 Nfix-003 protein_coding Mus_musculus 0 741
ENSMUST00000099070 Nfix-002 protein_coding Mus_musculus 0 741
ENSMUST00000109762 Nfix-004 protein_coding Mus_musculus 0 737
ENSMUST00000109764 Nfix-001 protein_coding Mus_musculus 0 741
ENSMUST00000126806 Nfix-005 protein_coding Mus_musculus 0 741
ENST00000341919 NFIC-004 protein_coding Homo_sapiens 0 566
ENST00000358552 NFIX-201 protein_coding Homo_sapiens 0 736
ENST00000360105 NFIX-003 protein_coding Homo_sapiens 0 736
ENST00000395111 NFIC-003 protein_coding Homo_sapiens 0 566
ENST00000397661 NFIX-001 protein_coding Homo_sapiens 0 736
ENST00000443272 NFIC-006 protein_coding Homo_sapiens 0 566
ENST00000585382 NFIX-009 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000585575 NFIX-006 protein_coding Homo_sapiens 0 736
ENST00000586797 NFIX-005 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000586873 NFIX-011 protein_coding Homo_sapiens 0 503
ENST00000586919 NFIC-011 protein_coding Homo_sapiens 0 566
ENST00000587260 NFIX-007 protein_coding Homo_sapiens 0 736
ENST00000587760 NFIX-002 protein_coding Homo_sapiens 0 736
ENST00000588228 NFIX-004 protein_coding Homo_sapiens 0 734
ENST00000589123 NFIC-001 protein_coding Homo_sapiens 0 566
ENST00000590027 NFIX-008 protein_coding Homo_sapiens 0 510
ENST00000590282 NFIC-005 protein_coding Homo_sapiens 0 566
ENST00000591028 NFIX-010 protein_coding Homo_sapiens 0 496
ENST00000592199 NFIX-013 protein_coding Homo_sapiens 0 736

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