C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | nuclear factor I/X | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000109762  |
Nfix-004 |
ENSMUSG00000001911 |
10090 | - |
8:84708626-84774369  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ZV | CIL_0007ZV_0002 | VISTA | 8:84428902-85032705 |
| CIL_0007VV | CIL_0007VV_0002 | VISTA | 8:84441926-85045230 |
| CIL_0004F9 | CIL_0004F9_0002 | CGP | 8:84699876-84800344 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006260 | IEA | DNA replication |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0021549 | IMP | cerebellum development |
| GO:0021680 | IMP | cerebellar Purkinje cell layer development |
| GO:0021707 | IMP | cerebellar granule cell differentiation |
| GO:0045944 | IDA | positive regulation of transcription from RNA polymerase II promoter |
| GO:0048708 | IMP | astrocyte differentiation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000090235
|
nfixb-202 | protein_coding | Danio_rerio | 0 | 737 |
|
ENSDART00000139001
|
nfixb-001 | protein_coding | Danio_rerio | 0 | 730 |
|
ENSDART00000044670
|
nfixb-201 | protein_coding | Danio_rerio | 0 | 710 |
|
ENSDART00000121795
|
nfixa-201 | protein_coding | Danio_rerio | 0 | 627 |
|
ENSDART00000135861
|
nfixa-001 | protein_coding | Danio_rerio | 0 | 503 |
|
ENST00000341919
|
NFIC-004 | protein_coding | Homo_sapiens | 0 | 560 |
|
ENST00000358552
|
NFIX-201 | protein_coding | Homo_sapiens | 0 | 1906 |
|
ENST00000360105
|
NFIX-003 | protein_coding | Homo_sapiens | 0 | 1906 |
|
ENST00000395111
|
NFIC-003 | protein_coding | Homo_sapiens | 0 | 564 |
|
ENST00000397661
|
NFIX-001 | protein_coding | Homo_sapiens | 0 | 1426 |
|
ENST00000443272
|
NFIC-006 | protein_coding | Homo_sapiens | 0 | 560 |
|
ENST00000585382
|
NFIX-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 562 |
|
ENST00000585575
|
NFIX-006 | protein_coding | Homo_sapiens | 0 | 1430 |
|
ENST00000586797
|
NFIX-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1424 |
|
ENST00000586873
|
NFIX-011 | protein_coding | Homo_sapiens | 0 | 795 |
|
ENST00000586919
|
NFIC-011 | protein_coding | Homo_sapiens | 0 | 564 |
|
ENST00000587260
|
NFIX-007 | protein_coding | Homo_sapiens | 0 | 1426 |
|
ENST00000587760
|
NFIX-002 | protein_coding | Homo_sapiens | 0 | 1495 |
|
ENST00000588228
|
NFIX-004 | protein_coding | Homo_sapiens | 0 | 1424 |
|
ENST00000588680
|
NFIX-012 | processed_transcript | Homo_sapiens | 0 | 390 |
|
ENST00000589123
|
NFIC-001 | protein_coding | Homo_sapiens | 0 | 564 |
|
ENST00000590027
|
NFIX-008 | protein_coding | Homo_sapiens | 0 | 815 |
|
ENST00000590282
|
NFIC-005 | protein_coding | Homo_sapiens | 0 | 560 |
|
ENST00000591028
|
NFIX-010 | protein_coding | Homo_sapiens | 0 | 767 |
|
ENST00000592199
|
NFIX-013 | protein_coding | Homo_sapiens | 0 | 1426 |
