C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, N-methyl D-aspartate 2D, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000103882 grin2db-201 ENSDARG00000070620 7955 - 16:14930567-15059419 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000103882
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000103882 1.551±1.03 0.398±0.00 2.804±2.46 0.039±0.00 0.070±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005215 IEA transporter activity
GO:0005216 IEA ion channel activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0005886 IEA plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030054 IEA cell junction
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032331 Grin2a-201 protein_coding Mus_musculus 0 497
ENSMUST00000048966 Tcf20-201 protein_coding Mus_musculus 0.0004 53
ENSMUST00000109510 Tcf20-202 protein_coding Mus_musculus 0.0004 53
ENSMUST00000115835 Grin2a-001 protein_coding Mus_musculus 0 497
ENST00000330684 GRIN2A-002 protein_coding Homo_sapiens 0 536
ENST00000396573 GRIN2A-001 protein_coding Homo_sapiens 0 536
ENST00000396575 GRIN2A-201 protein_coding Homo_sapiens 0 536
ENST00000535259 GRIN2A-202 protein_coding Homo_sapiens 0 536
ENST00000562109 GRIN2A-006 protein_coding Homo_sapiens 0 536
ENST00000609686 GRIN2B-001 protein_coding Homo_sapiens 0 529

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