C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, N-methyl D-aspartate 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535259 GRIN2A-202 ENSG00000183454 9606 - 16:9762676-9938558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLungTestisENST00000535259
Transcript ID Adipose Lung Testis
ENST00000535259 0.022±0.00 0.083±0.00 1.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EM CIL_0000EM_0001 CGP 16:9091648-10182754

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004970 IEA ionotropic glutamate receptor activity
GO:0005234 IEA extracellular-glutamate-gated ion channel activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034220 IEA ion transmembrane transport
GO:0035235 IEA ionotropic glutamate receptor signaling pathway
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032331 Grin2a-201 protein_coding Mus_musculus 0 4080
ENSMUST00000115835 Grin2a-001 protein_coding Mus_musculus 0 4080
ENSMUST00000111905 Grin2b-201 protein_coding Mus_musculus 0 869
ENSMUST00000053880 Grin2b-001 protein_coding Mus_musculus 0 869
ENSMUST00000106554 Grin2c-201 protein_coding Mus_musculus 0 649
ENSMUST00000003351 Grin2c-001 protein_coding Mus_musculus 0 649
ENSMUST00000002848 Grin2d-001 protein_coding Mus_musculus 0 560
ENSDART00000103882 grin2db-201 protein_coding Danio_rerio 0 536
ENSDART00000144062 grin2db-001 protein_coding Danio_rerio 0 536

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