C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: vinculin a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000110304 vcla-202 ENSDARG00000044968 7955 - 13:25436301-25508068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENSDART00000110304
Transcript ID Heart Liver
ENSDART00000110304 2.041±0.03 0.077±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0007155 IEA cell adhesion
GO:0015629 IEA actin cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022369 Vcl-201 protein_coding Mus_musculus 0 414
ENSMUST00000122974 Ap3m1-008 processed_transcript Mus_musculus 2e-37 159
ENSMUST00000131469 Ap3m1-009 processed_transcript Mus_musculus 2e-37 159
ENSMUST00000154460 Ap3m1-001 protein_coding Mus_musculus 3e-36 159
ENST00000211998 VCL-201 protein_coding Homo_sapiens 0 508
ENST00000372755 VCL-001 protein_coding Homo_sapiens 0 425
ENST00000436396 VCL-002 protein_coding Homo_sapiens 0 508
ENST00000623461 VCL-007 processed_transcript Homo_sapiens 0 425

Loading