C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127297 ddx42-001 ENSDARG00000037928 7955 - 3:32016418-32029984 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000127297
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000127297 10.601±6.80 5.734±2.92 7.275±0.00 0.642±0.00 4.730±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0008026 IEA ATP-dependent helicase activity
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021046 Ddx42-001 protein_coding Mus_musculus 0 933
ENST00000359353 DDX42-010 protein_coding Homo_sapiens 0 904
ENST00000389924 DDX42-201 protein_coding Homo_sapiens 0 904
ENST00000457800 DDX42-202 protein_coding Homo_sapiens 0 894
ENST00000577940 DDX42-006 nonsense_mediated_decay Homo_sapiens 0 195
ENST00000578681 DDX42-001 protein_coding Homo_sapiens 0 904
ENST00000583590 DDX42-002 protein_coding Homo_sapiens 0 904

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