C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyperpolarization activated cyclic nucleotide-gated potassium channel 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000136390 hcn2b-001 ENSDARG00000061665 7955 + 22:19176868-19232055 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000136390
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000136390 4.960±2.83 25.427±0.54 0.356±0.15 0.079±0.00 0.728±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZK CIL_0005ZK_0001 CGP 22:19176868-19420640

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006991 Hcn1-001 protein_coding Mus_musculus 0 909
ENSMUST00000029686 Hcn3-001 protein_coding Mus_musculus 0 713
ENSMUST00000127654 Hcn3-004 retained_intron Mus_musculus 0 272
ENSMUST00000132156 Hcn3-003 retained_intron Mus_musculus 0 401
ENST00000251287 HCN2-001 protein_coding Homo_sapiens 0 1319
ENST00000261917 HCN4-001 protein_coding Homo_sapiens 0 1177
ENST00000303230 HCN1-001 protein_coding Homo_sapiens 0 920
ENST00000368358 HCN3-001 protein_coding Homo_sapiens 0 758
ENST00000496230 HCN3-002 processed_transcript Homo_sapiens 0 342
ENST00000572822 HCN3-002 processed_transcript Homo_sapiens 0 342
ENST00000575670 HCN3-001 protein_coding Homo_sapiens 0 758

Loading