C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hyperpolarization-activated, cyclic nucleotide-gated K+ 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029686 Hcn3-001 ENSMUSG00000028051 10090 - 3:89146074-89160196 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029686
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029686 0.033±0.00 3.220±1.40 0.075±0.00 4.581±2.95 0.545±0.29 0.099±0.04 1.667±0.11 10.361±2.81 0.128±0.02 0.018±0.00 1.180±0.70 1.046±0.88 0.360±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005248 IEA voltage-gated sodium channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0030552 IEA cAMP binding
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035725 IEA sodium ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093300 hcn4-201 protein_coding Danio_rerio 0 887
ENSDART00000136140 hcn4-001 protein_coding Danio_rerio 0 887
ENSDART00000113932 HCN1-201 protein_coding Danio_rerio 0 723
ENSDART00000136390 hcn2b-001 protein_coding Danio_rerio 0 713
ENSDART00000151713 hcn3-201 protein_coding Danio_rerio 0 586
ENSDART00000039325 hcn3-001 protein_coding Danio_rerio 0 586
ENST00000251287 HCN2-001 protein_coding Homo_sapiens 0 1103
ENST00000261917 HCN4-001 protein_coding Homo_sapiens 0 1158
ENST00000368358 HCN3-001 protein_coding Homo_sapiens 0 2833
ENST00000467204 HCN3-003 processed_transcript Homo_sapiens 0 525
ENST00000496230 HCN3-002 processed_transcript Homo_sapiens 0 1031
ENST00000568218 RP13-395E19.2-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000569415 RP11-261B23.1-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000572822 HCN3-002 processed_transcript Homo_sapiens 0 1031
ENST00000575670 HCN3-001 protein_coding Homo_sapiens 0 2833
ENST00000576844 HCN3-003 processed_transcript Homo_sapiens 0 525

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