C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000146185 krt5-003 ENSDARG00000058371 7955 - 23:10281283-10282787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSDART00000146185
Transcript ID Liver
ENSDART00000146185 0.044±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0002 CGP 23:10280085-10360516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 9e-26 122
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 224
ENSMUST00000159029 5430421N21Rik-002 retained_intron Mus_musculus 5e-26 122
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 270
ENST00000549754 KRT6A-003 retained_intron Homo_sapiens 0 219
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000558927 KRT8P9-001 processed_pseudogene Homo_sapiens 9e-30 135

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