C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 6A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549754 KRT6A-003 ENSG00000205420 9606 - 12:52490280-52491625 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000B CGP 12:52468516-52493257
CIL_00033Q CIL_00033Q_000N CGP 12:52487174-52520687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 525
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 497
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 427
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 0 364
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 298
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 0 270
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 0 267
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 257
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0 239
ENSDART00000081223 krt5-201 protein_coding Danio_rerio 0 219
ENSDART00000146185 krt5-003 protein_coding Danio_rerio 0 219
ENSDART00000129044 krt5-001 protein_coding Danio_rerio 0 219
ENSDART00000081215 krt8-001 protein_coding Danio_rerio 9.00054e-42 174
ENSDART00000142261 krt8-002 retained_intron Danio_rerio 2e-33 147

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