C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 6A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549898 KRT6A-002 ENSG00000205420 9606 - 12:52489977-52492709 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverOvaryPlacentaENST00000549898
Transcript ID Brain Breast Liver Ovary Placenta
ENST00000549898 0.040±0.00 0.011±0.00 0.076±0.00 161.941±0.00 11.995±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000B CGP 12:52468516-52493257
CIL_00033Q CIL_00033Q_000N CGP 12:52487174-52520687

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 544
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 510
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 460
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 0 422
ENSMUST00000062879 Gm5414-201 protein_coding Mus_musculus 0 307
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 257
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 228
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 0 217
ENSDART00000081223 krt5-201 protein_coding Danio_rerio 0 217
ENSDART00000129044 krt5-001 protein_coding Danio_rerio 0 217
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 5.60519e-45 185
ENSDART00000081215 krt8-001 protein_coding Danio_rerio 6.02558e-44 182
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 2.00386e-43 180
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 2.00386e-43 180
ENSDART00000146185 krt5-003 protein_coding Danio_rerio 2.00386e-43 180
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 9.99995e-41 171
ENSDART00000142261 krt8-002 retained_intron Danio_rerio 4e-26 122

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