C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000023786 Krt6b-201 ENSMUSG00000023041 10090 - 15:101676034-101680289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLungOvaryPlacentaTestisENSMUST00000023786
Transcript ID Brain Breast Heart Lung Ovary Placenta Testis
ENSMUST00000023786 0.006±0.00 0.020±0.00 0.013±0.00 0.549±0.07 0.410±0.20 0.014±0.01 0.017±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000R CGP 15:101676034-101694307

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002009 IGI morphogenesis of an epithelium
GO:0005198 IEA structural molecule activity
GO:0031424 IGI keratinization
GO:0045095 IEA keratin filament
GO:0045109 IGI intermediate filament organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081223 krt5-201 protein_coding Danio_rerio 0 403
ENSDART00000129044 krt5-001 protein_coding Danio_rerio 0 403
ENSDART00000146185 krt5-003 protein_coding Danio_rerio 0 224
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 7e-23 113
ENST00000224237 VIM-001 protein_coding Homo_sapiens 0.000000000002 79
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 1134
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 0 905
ENST00000252250 KRT6C-001 protein_coding Homo_sapiens 0 1718
ENST00000252252 KRT6B-001 protein_coding Homo_sapiens 0 1705
ENST00000257951 KRT84-001 protein_coding Homo_sapiens 0 316
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 0 449
ENST00000304620 KRT78-001 protein_coding Homo_sapiens 0 292
ENST00000330553 KRT79-001 protein_coding Homo_sapiens 0 566
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 1759
ENST00000331817 KRT7-001 protein_coding Homo_sapiens 0 566
ENST00000332411 KRT76-001 protein_coding Homo_sapiens 0 597
ENST00000359499 KRT78-002 protein_coding Homo_sapiens 0 206
ENST00000396270 KRT8P39-001 processed_pseudogene Homo_sapiens 0 239
ENST00000409686 KRT8P11-001 processed_pseudogene Homo_sapiens 0 353
ENST00000413425 KRT8P18-001 processed_pseudogene Homo_sapiens 0 224
ENST00000414328 KRT8P45-001 processed_pseudogene Homo_sapiens 0 327
ENST00000417996 KRT3-001 protein_coding Homo_sapiens 0 627
ENST00000423953 KRT8P20-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000425226 KRT8P15-001 processed_pseudogene Homo_sapiens 0 255
ENST00000430398 KRT8P21-001 processed_pseudogene Homo_sapiens 9e-35 152
ENST00000441609 KRT8P44-001 processed_pseudogene Homo_sapiens 1.4013e-45 187
ENST00000463294 KRT8P13-001 processed_pseudogene Homo_sapiens 0 339
ENST00000468527 KRT8P12-002 processed_transcript Homo_sapiens 6e-20 102
ENST00000469543 VIM-003 nonsense_mediated_decay Homo_sapiens 0.0000000000008 81
ENST00000472924 KRT8P12-001 transcribed_processed_pseudogene Homo_sapiens 2e-36 158
ENST00000473150 KRT8P25-001 processed_pseudogene Homo_sapiens 0 276
ENST00000487938 VIM-002 nonsense_mediated_decay Homo_sapiens 0.000000000002 79
ENST00000489121 KRT8P36-001 processed_pseudogene Homo_sapiens 0 309
ENST00000508125 KRT8P33-001 processed_pseudogene Homo_sapiens 0 344
ENST00000512037 KRT8P46-001 processed_pseudogene Homo_sapiens 0 279
ENST00000512863 KRT8P32-001 processed_pseudogene Homo_sapiens 0 311
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 0 409
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 0 292
ENST00000534154 KRT8P26-001 processed_pseudogene Homo_sapiens 3e-29 134
ENST00000544301 VIM-201 protein_coding Homo_sapiens 0.000000000002 79
ENST00000546542 KRT8-015 protein_coding Homo_sapiens 0.000000002 68
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 3e-37 161
ENST00000546826 KRT8-013 protein_coding Homo_sapiens 0 287
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 0 449
ENST00000547110 KRT78-003 protein_coding Homo_sapiens 8e-27 124
ENST00000547413 KRT8-016 protein_coding Homo_sapiens 7e-38 161
ENST00000547613 KRT7-005 processed_transcript Homo_sapiens 2e-27 126
ENST00000547890 KRT5-010 retained_intron Homo_sapiens 0 300
ENST00000548409 KRT5-008 protein_coding Homo_sapiens 0 540
ENST00000548735 KRT6A-005 retained_intron Homo_sapiens 0 289
ENST00000548998 KRT8-014 protein_coding Homo_sapiens 0 219
ENST00000549511 KRT5-009 retained_intron Homo_sapiens 0 536
ENST00000549600 KRT6A-004 retained_intron Homo_sapiens 0 399
ENST00000549754 KRT6A-003 retained_intron Homo_sapiens 0 497
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 0 510
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 2.00386e-43 182
ENST00000551013 KRT5-006 retained_intron Homo_sapiens 0 291
ENST00000551188 KRT5-007 protein_coding Homo_sapiens 0 313
ENST00000551916 KRT8P19-001 processed_pseudogene Homo_sapiens 0 241
ENST00000551956 KRT4-001 protein_coding Homo_sapiens 0 545
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 0 449
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 0 449
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 1099
ENST00000552668 KRT4-003 nonsense_mediated_decay Homo_sapiens 4e-24 115
ENST00000553087 KRT6C-002 retained_intron Homo_sapiens 0 422
ENST00000557533 KRT8P1-001 processed_pseudogene Homo_sapiens 0 211
ENST00000558927 KRT8P9-001 processed_pseudogene Homo_sapiens 0 287
ENST00000560090 KRT8P23-001 processed_pseudogene Homo_sapiens 0 292
ENST00000562022 KRT8P50-001 processed_pseudogene Homo_sapiens 0 268
ENST00000604727 KRT8P47-001 processed_pseudogene Homo_sapiens 0 267
ENST00000622375 TTBK2-201 protein_coding Homo_sapiens 4e-39 169

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