C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zgc:171759
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000152449 zgc:171759-001 ENSDARG00000039547 7955 + 25:37383761-37384135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000152449
Transcript ID Muscle
ENSDART00000152449 0.590±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0004 UCNEbase 25:37216824-37485434
CIL_0000LK CIL_0000LK_0001 CGP 25:37383761-37385647

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 339
ENST00000369155 HIST2H2BE-001 protein_coding Homo_sapiens 0 379
ENST00000369160 HIST2H2BE-201 protein_coding Homo_sapiens 0 377
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 361
ENST00000377401 HIST1H2BL-001 protein_coding Homo_sapiens 0 366
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 339
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 339
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 331
ENST00000449108 HIST2H2BB-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 339
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 353
ENST00000541790 HIST1H2BG-001 protein_coding Homo_sapiens 0 339
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 357
ENST00000609585 HIST2H2BB-002 processed_transcript Homo_sapiens 0 335
ENST00000614097 HIST1H2BE-001 protein_coding Homo_sapiens 0 355
ENST00000615966 HIST1H2BB-001 protein_coding Homo_sapiens 0 305

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