C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin IXB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000595641 MYO9B-003 ENSG00000099331 9606 + 19:17101718-17212099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000595641
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000595641 4.712±0.00 4.925±0.00 1.730±1.37 1.936±0.36 2.387±0.55 1.294±0.00 1.114±0.00 2.795±1.45 1.256±0.00 4.803±1.06 2.954±0.00 4.979±1.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GM CIL_0006GM_0001 CGP 19:17049729-17214537
CIL_0006GE CIL_0006GE_0001 CGP 19:17075781-17219829

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071935 Myo9b-201 protein_coding Mus_musculus 0 3328
ENSMUST00000168839 Myo9b-202 protein_coding Mus_musculus 0 3328
ENSMUST00000170242 Myo9b-203 protein_coding Mus_musculus 0 3328
ENSDART00000045539 myo5c-201 protein_coding Danio_rerio 1e-24 121
ENSDART00000153975 myo5c-001 protein_coding Danio_rerio 1e-24 121
ENSMUST00000144725 Myo1g-002 nonsense_mediated_decay Mus_musculus 1e-18 100
ENSMUST00000003459 Myo1g-001 protein_coding Mus_musculus 1e-18 100
ENSMUST00000131823 Myo1g-006 retained_intron Mus_musculus 0.00000000000001 88
ENSMUST00000156878 Myo1g-004 retained_intron Mus_musculus 0.0000000000001 84
ENSDART00000042203 myo6b-201 protein_coding Danio_rerio 0.0000002 64
ENSDART00000088801 myo6b-202 protein_coding Danio_rerio 0.0000002 64
ENSDART00000131566 myo6b-002 protein_coding Danio_rerio 0.0000002 64
ENSDART00000061762 myo6b-001 protein_coding Danio_rerio 0.0000002 64

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