C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily c, polypeptide 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003137 Cyp2c29-001 ENSMUSG00000003053 10090 + 19:39287074-39330699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000003137
Transcript ID Adipose Adrenal Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000003137 0.134±0.04 0.689±0.13 3.412±0.38 0.225±0.04 0.058±0.00 876.535±231.11 0.216±0.11 0.078±0.06 0.526±0.13 0.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_000S CGP 19:39113898-39330713
CIL_0007H6 CIL_0007H6_000B CGP 19:39269405-39463075

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005506 IEA iron ion binding
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process
GO:0070330 IEA aromatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260682 CYP2C9-001 protein_coding Homo_sapiens 0 1162
ENST00000285979 CYP2C18-001 protein_coding Homo_sapiens 0 1182
ENST00000339022 CYP2C18-002 protein_coding Homo_sapiens 0 571
ENST00000371270 CYP2C8-001 protein_coding Homo_sapiens 0 918
ENST00000371321 CYP2C19-001 protein_coding Homo_sapiens 0 1092
ENST00000464755 RP11-400G3.5-001 nonsense_mediated_decay Homo_sapiens 0 974
ENST00000479946 CYP2C8-002 retained_intron Homo_sapiens 0 510
ENST00000490994 CYP2C8-008 nonsense_mediated_decay Homo_sapiens 0 798
ENST00000525991 CYP2C8-007 nonsense_mediated_decay Homo_sapiens 0 715
ENST00000526814 CYP2C8-005 retained_intron Homo_sapiens 0 715
ENST00000527420 CYP2C8-003 nonsense_mediated_decay Homo_sapiens 0 713
ENST00000527953 CYP2C8-006 retained_intron Homo_sapiens 0 510
ENST00000531714 CYP2C8-011 retained_intron Homo_sapiens 0 198
ENST00000533320 CYP2C8-004 retained_intron Homo_sapiens 0 715
ENST00000535898 CYP2C8-201 protein_coding Homo_sapiens 0 715
ENST00000539050 CYP2C8-202 protein_coding Homo_sapiens 0 798
ENST00000623108 CYP2C8-203 protein_coding Homo_sapiens 0 798

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