C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily C, polypeptide 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371270 CYP2C8-001 ENSG00000138115 9606 - 10:95036773-95069497 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000371270
Transcript ID Kidney
ENST00000371270 187.477±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_0003 CGP 10:94938658-95069497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IDA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006082 IDA organic acid metabolic process
GO:0006805 TAS xenobiotic metabolic process
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0017144 IDA drug metabolic process
GO:0019369 TAS arachidonic acid metabolic process
GO:0019373 TAS epoxygenase P450 pathway
GO:0020037 IEA heme binding
GO:0034875 IDA caffeine oxidase activity
GO:0042738 IDA exogenous drug catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IDA:IEA oxidation-reduction process
GO:0070330 IEA aromatase activity
GO:0070989 IDA oxidative demethylation
GO:0097267 TAS omega-hydroxylase P450 pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025966 Cyp2c55-001 protein_coding Mus_musculus 0 1053
ENSMUST00000087234 Cyp2c66-001 protein_coding Mus_musculus 0 1000
ENSMUST00000080171 Cyp2c50-001 protein_coding Mus_musculus 0 974
ENSMUST00000087236 Cyp2c65-001 protein_coding Mus_musculus 0 966
ENSMUST00000025968 Cyp2c39-001 protein_coding Mus_musculus 0 941
ENSMUST00000003137 Cyp2c29-001 protein_coding Mus_musculus 0 918
ENSMUST00000049178 Cyp2c37-001 protein_coding Mus_musculus 0 902
ENSMUST00000048959 Cyp2c54-201 protein_coding Mus_musculus 0 885
ENSMUST00000146494 Cyp2c66-002 nonsense_mediated_decay Mus_musculus 0 833
ENSMUST00000176624 Cyp2c29-003 protein_coding Mus_musculus 0 798
ENSMUST00000177087 Cyp2c29-002 nonsense_mediated_decay Mus_musculus 0 756
ENSMUST00000099472 Cyp2c68-001 protein_coding Mus_musculus 0 701
ENSMUST00000067328 Cyp2c67-001 protein_coding Mus_musculus 0 678
ENSMUST00000160476 Cyp2c40-001 protein_coding Mus_musculus 0 678
ENSMUST00000168838 Cyp2c69-201 protein_coding Mus_musculus 0 667
ENSMUST00000068094 Cyp2c50-002 protein_coding Mus_musculus 0 483
ENSMUST00000124391 Cyp2c50-003 retained_intron Mus_musculus 0 477
ENSMUST00000162630 Cyp2c40-002 nonsense_mediated_decay Mus_musculus 0 422

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