C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000357641 BRPF3-001 ENSG00000096070 9606 + 6:36196744-36232790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357641 1.937±0.00 1.171±0.00 2.078±0.00 1.581±0.00 0.590±0.09 2.333±1.55 2.941±0.00 3.039±0.00 0.843±0.00 2.506±0.00 6.004±0.00 4.895±4.42 2.552±0.10 6.316±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O6 CIL_0002O6_0001 CGP 6:36127809-36232790
CIL_0002O9 CIL_0002O9_0001 CGP 6:36196744-36308595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002576 TAS platelet degranulation
GO:0005515 IPI:IEA protein binding
GO:0005576 TAS extracellular region
GO:0005829 TAS cytosol
GO:0007596 TAS blood coagulation
GO:0008270 IEA zinc ion binding
GO:0030168 TAS platelet activation
GO:0043966 IDA histone H3 acetylation
GO:0070776 IDA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004985 Brpf3-001 protein_coding Mus_musculus 0 4527
ENSMUST00000156029 Brpf3-002 retained_intron Mus_musculus 0 2379
ENSMUST00000140973 Brpf3-004 processed_transcript Mus_musculus 0 1133
ENSMUST00000140587 Brpf3-009 processed_transcript Mus_musculus 0 931
ENSMUST00000127007 Brpf3-007 processed_transcript Mus_musculus 0 833
ENSMUST00000144022 Brpf3-003 processed_transcript Mus_musculus 0 470
ENSMUST00000126868 Brpf3-006 processed_transcript Mus_musculus 0 466
ENSMUST00000148149 Brpf3-010 retained_intron Mus_musculus 0 420
ENSMUST00000088911 Brd1-003 protein_coding Mus_musculus 0 383
ENSMUST00000109380 Brd1-002 protein_coding Mus_musculus 0 383
ENSMUST00000109381 Brd1-001 protein_coding Mus_musculus 0 383
ENSMUST00000123942 Brpf3-005 processed_transcript Mus_musculus 0 348

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