C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441730 BRPF3-005 ENSG00000096070 9606 + 6:36211448-36232787 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000441730
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000441730 1.616±0.00 3.230±0.00 2.182±1.17 1.033±0.00 2.852±0.00 1.607±0.00 3.744±0.00 2.081±0.00 1.917±0.00 4.360±0.00 5.139±2.25 11.158±3.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O6 CIL_0002O6_0001 CGP 6:36127809-36232790
CIL_0002O9 CIL_0002O9_0001 CGP 6:36196744-36308595

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140973 Brpf3-004 processed_transcript Mus_musculus 0 852
ENSMUST00000004985 Brpf3-001 protein_coding Mus_musculus 0 852
ENSMUST00000127007 Brpf3-007 processed_transcript Mus_musculus 0 682
ENSMUST00000140587 Brpf3-009 processed_transcript Mus_musculus 0 651
ENSMUST00000144022 Brpf3-003 processed_transcript Mus_musculus 0 514
ENSMUST00000156029 Brpf3-002 retained_intron Mus_musculus 0 459

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