C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 22, member 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497691 SLC22A23-008 ENSG00000137266 9606 - 6:3271774-3444969 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000497691
Transcript ID Bladder
ENST00000497691 1.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081I CIL_00081I_0001 VISTA 6:2946622-3549686
CIL_000823 CIL_000823_0001 VISTA 6:3049163-3652023
CIL_0003IV CIL_0003IV_0001 CGP 6:3224261-3303373
CIL_00015Z CIL_00015Z_0002 CGP 6:3231403-3457022
CIL_0003IW CIL_0003IW_0001 CGP 6:3268962-3752026

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148390 Slc22a23-002 protein_coding Mus_musculus 0 1151
ENSMUST00000040336 Slc22a23-001 protein_coding Mus_musculus 0 1040
ENSMUST00000143353 Slc22a23-005 processed_transcript Mus_musculus 0 686
ENSMUST00000128392 Slc22a23-006 retained_intron Mus_musculus 0 610
ENSMUST00000145038 Slc22a23-004 nonsense_mediated_decay Mus_musculus 0 503

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