C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MMS22-like, DNA repair protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000050446 Mms22l-008 ENSMUSG00000045751 10090 + 4:24496544-24602946 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastLiverMuscleOvaryPlacentaTestisENSMUST00000050446
Transcript ID Adipose Breast Liver Muscle Ovary Placenta Testis
ENSMUST00000050446 0.121±0.00 0.422±0.12 0.565±0.00 0.014±0.00 0.917±0.39 0.408±0.00 0.564±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MX CIL_0007MX_0004 UCNEbase 4:22803646-24698662
CIL_0008CQ CIL_0008CQ_0002 VISTA 4:23912230-24515243
CIL_0007TH CIL_0007TH_0002 VISTA 4:24128853-24730297
CIL_00096U CIL_00096U_0002 VISTA 4:24369206-24970330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275053 MMS22L-001 protein_coding Homo_sapiens 0 2326
ENST00000369251 MMS22L-010 protein_coding Homo_sapiens 0 3356
ENST00000484170 MMS22L-004 processed_transcript Homo_sapiens 0 385
ENST00000496119 MMS22L-002 nonsense_mediated_decay Homo_sapiens 0 307
ENST00000506256 MMS22L-011 processed_transcript Homo_sapiens 0 387
ENST00000508820 MMS22L-005 retained_intron Homo_sapiens 0 529
ENST00000508976 MMS22L-007 retained_intron Homo_sapiens 0 983
ENST00000509383 MMS22L-006 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000511335 MMS22L-009 retained_intron Homo_sapiens 0.000000000000001 92

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