C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MMS22-like, DNA repair protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369251 MMS22L-010 ENSG00000146263 9606 - 6:97146545-97282553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleOvaryTestisENST00000369251
Transcript ID Lung Muscle Ovary Testis
ENST00000369251 0.086±0.00 0.025±0.00 1.308±0.00 2.053±0.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096U CIL_00096U_0001 VISTA 6:96796735-97397883
CIL_0001Y2 CIL_0001Y2_0002 CGP 6:96924620-97283217
CIL_0007TH CIL_0007TH_0001 VISTA 6:97006167-97607637
CIL_0007MX CIL_0007MX_0001 UCNEbase 6:97068636-99185945
CIL_0001Y3 CIL_0001Y3_0002 CGP 6:97142161-98839490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050446 Mms22l-008 protein_coding Mus_musculus 0 3356
ENSMUST00000108222 Mms22l-001 protein_coding Mus_musculus 0 2326
ENSMUST00000154349 Mms22l-002 retained_intron Mus_musculus 0 2311
ENSMUST00000131282 Mms22l-003 nonsense_mediated_decay Mus_musculus 0 1740
ENSMUST00000173079 Mms22l-007 retained_intron Mus_musculus 0 1380
ENSMUST00000123984 Mms22l-010 processed_transcript Mus_musculus 0 616
ENSMUST00000138567 Mms22l-005 protein_coding Mus_musculus 0 531
ENSMUST00000154496 Mms22l-006 protein_coding Mus_musculus 0 329
ENSMUST00000139050 Mms22l-004 processed_transcript Mus_musculus 1e-31 143

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