C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1564 VISTA 9606 6:97164949-97768106
GeneTranscriptPositionBiotype
ENSG00000146263 (MMS22L)
MMS22-like, DNA repair protein 		ENST00000275053 (MMS22L-001) 97142161-97283176 protein_coding
ENST00000369251 (MMS22L-010) 97146545-97282553 protein_coding
ENST00000482634 (MMS22L-003) 97245979-97263352 protein_coding
ENST00000484170 (MMS22L-004) 97259663-97272795 processed_transcript
ENST00000496119 (MMS22L-002) 97267904-97283210 nonsense_mediated_decay
ENST00000506256 (MMS22L-011) 97259372-97272801 processed_transcript
ENST00000508820 (MMS22L-005) 97265720-97283217 retained_intron
ENST00000508976 (MMS22L-007) 97253465-97282511 retained_intron
ENST00000509383 (MMS22L-006) 97230269-97283188 nonsense_mediated_decay
ENST00000510018 (MMS22L-008) 97233861-97281304 protein_coding
ENST00000511335 (MMS22L-009) 97258663-97273105 retained_intron
ENST00000514790 (MMS22L-012) 97151578-97162045 retained_intron
ENSG00000224849 (RP1-104O17.1)
 ENST00000433637 (RP1-104O17.1-001) 97702281-97708103 lincRNA
ENSG00000226207 (RP1-104O17.3)
 ENST00000432438 (RP1-104O17.3-001) 97710953-97717197 lincRNA
ENSG00000226684 (RP3-418C23.2)
 ENST00000457513 (RP3-418C23.2-001) 97283303-97306098 lincRNA
ENST00000574739 (RP3-418C23.2-003) 97305586-97310048 lincRNA
CIL_0008CQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1564 VISTA 10090 4:23912230-24515243
GeneTranscriptPositionBiotype
ENSMUSG00000045751 (Mms22l)
MMS22-like, DNA repair protein 		ENSMUST00000050446 (Mms22l-008) 24496544-24602946 protein_coding
ENSMUST00000108222 (Mms22l-001) 24496451-24602950 protein_coding
ENSMUST00000123984 (Mms22l-010) 24578848-24591208 processed_transcript
ENSMUST00000131282 (Mms22l-003) 24507434-24599984 nonsense_mediated_decay
ENSMUST00000138567 (Mms22l-005) 24496462-24503413 protein_coding
ENSMUST00000139050 (Mms22l-004) 24496465-24497044 processed_transcript
ENSMUST00000154349 (Mms22l-002) 24505162-24602949 retained_intron
ENSMUST00000154496 (Mms22l-006) 24536348-24574795 protein_coding
ENSMUST00000172622 (Mms22l-009) 24497896-24529163 protein_coding
ENSMUST00000173079 (Mms22l-007) 24496451-24581338 retained_intron
ENSMUSG00000083154 (Gm11892)
predicted gene 11892 		ENSMUST00000117711 (Gm11892-001) 24238100-24239301 processed_pseudogene
ENSMUSG00000099150 (Gm27243)
predicted gene 27243 		ENSMUST00000183964 (Gm27243-001) 24430370-24430890 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CQ_0001ENSG00000146263ENST00000275053ENST00000369251ENST00000482634ENST00000484170ENST00000496119ENST00000506256ENST00000508820ENST00000508976ENST00000509383ENST00000510018ENST00000511335ENST00000514790ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000226684ENST00000457513ENST00000574739CIL_0008CQ_0002ENSMUSG00000045751ENSMUST00000050446ENSMUST00000108222ENSMUST00000123984ENSMUST00000131282ENSMUST00000138567ENSMUST00000139050ENSMUST00000154349ENSMUST00000154496ENSMUST00000172622ENSMUST00000173079ENSMUSG00000083154ENSMUST00000117711ENSMUSG00000099150ENSMUST00000183964
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CQ_0001ENSG00000146263ENST00000275053ENST00000369251ENST00000496119ENST00000506256ENST00000508820ENST00000509383ENST00000511335ENSG00000224849ENST00000433637ENSG00000226207ENST00000432438ENSG00000226684ENST00000457513ENST00000574739CIL_0008CQ_0002ENSMUSG00000045751ENSMUST00000050446ENSMUST00000108222ENSMUST00000123984ENSMUST00000131282ENSMUST00000138567ENSMUST00000154349ENSMUST00000154496ENSMUST00000172622ENSMUST00000173079ENSMUSG00000083154ENSMUST00000117711ENSMUSG00000099150ENSMUST00000183964
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146263 ENST00000275053 0.103±0.00 0.439±0.00 N/A 0.307±0.00 N/A 0.234±0.00 0.062±0.00 N/A 0.276±0.25 0.105±0.00 N/A 0.295±0.14 0.371±0.26 0.807±0.41
ENST00000369251 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 0.025±0.00 1.308±0.00 N/A 2.053±0.54
ENST00000482634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496119 N/A N/A N/A N/A N/A N/A N/A 0.724±0.00 N/A N/A N/A N/A N/A N/A
ENST00000506256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A
ENST00000508820 N/A N/A N/A N/A 0.322±0.00 0.391±0.00 N/A 0.101±0.00 N/A N/A N/A 0.498±0.00 N/A N/A
ENST00000508976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509383 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A N/A N/A
ENST00000510018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511335 0.094±0.00 0.223±0.00 0.117±0.00 0.079±0.02 0.116±0.00 N/A 0.055±0.00 0.084±0.00 0.023±0.00 0.209±0.00 0.010±0.01 0.147±0.09 0.069±0.00 N/A
ENST00000514790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224849 ENST00000433637 N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A 0.309±0.00 1.257±0.00 N/A N/A N/A 0.018±0.00
ENSG00000226207 ENST00000432438 N/A N/A N/A 0.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00
ENSG00000226684 ENST00000457513 N/A N/A N/A 0.218±0.00 N/A N/A 0.048±0.00 N/A N/A N/A N/A 0.124±0.00 N/A 0.167±0.00
ENST00000574739 N/A N/A N/A 0.621±0.44 N/A N/A N/A N/A N/A 0.061±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045751 ENSMUST00000050446 0.121±0.00 N/A N/A N/A 0.422±0.12 N/A N/A N/A 0.565±0.00 N/A 0.014±0.00 0.917±0.39 0.408±0.00 0.564±0.06
ENSMUST00000108222 0.674±0.28 0.356±0.00 0.551±0.23 1.816±0.17 0.570±0.12 0.960±0.18 0.088±0.02 0.348±0.05 4.629±3.33 0.758±0.00 N/A 1.537±0.63 3.540±1.75 1.160±0.60
ENSMUST00000123984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 N/A N/A 3.460±0.00
ENSMUST00000131282 N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A
ENSMUST00000138567 0.988±0.12 1.295±0.33 0.785±0.21 2.679±2.03 1.309±0.24 1.385±0.68 0.100±0.02 0.277±0.08 3.363±3.38 0.581±0.11 0.071±0.02 1.302±0.27 2.482±1.68 1.594±0.24
ENSMUST00000139050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154349 0.344±0.00 N/A 0.224±0.00 1.324±0.04 0.373±0.17 0.598±0.00 0.081±0.07 N/A 1.655±0.71 N/A 0.024±0.01 0.631±0.00 0.874±0.09 0.801±0.00
ENSMUST00000154496 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A
ENSMUST00000172622 N/A N/A N/A 0.155±0.00 N/A N/A N/A N/A N/A N/A 0.036±0.03 N/A N/A N/A
ENSMUST00000173079 N/A N/A N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A
ENSMUSG00000083154 ENSMUST00000117711 N/A N/A N/A 1.048±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.01
ENSMUSG00000099150 ENSMUST00000183964 N/A N/A N/A 2.272±1.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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