C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MMS22-like, DNA repair protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511335 MMS22L-009 ENSG00000146263 9606 - 6:97258663-97273105 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000511335
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000511335 0.094±0.00 0.223±0.00 0.117±0.00 0.079±0.02 0.116±0.00 0.055±0.00 0.084±0.00 0.023±0.00 0.209±0.00 0.010±0.01 0.147±0.09 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096U CIL_00096U_0001 VISTA 6:96796735-97397883
CIL_0001Y2 CIL_0001Y2_0002 CGP 6:96924620-97283217
CIL_0007TH CIL_0007TH_0001 VISTA 6:97006167-97607637
CIL_0007MX CIL_0007MX_0001 UCNEbase 6:97068636-99185945
CIL_0001Y3 CIL_0001Y3_0002 CGP 6:97142161-98839490

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131282 Mms22l-003 nonsense_mediated_decay Mus_musculus 0.000000000000001 92
ENSMUST00000154349 Mms22l-002 retained_intron Mus_musculus 0.000000000000001 92
ENSMUST00000050446 Mms22l-008 protein_coding Mus_musculus 0.000000000000001 92
ENSMUST00000108222 Mms22l-001 protein_coding Mus_musculus 0.000000000000001 92
ENSMUST00000173079 Mms22l-007 retained_intron Mus_musculus 0.000000000000001 92

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