Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	ribosomal protein S23
ENSMUST00000051955	Rps23-201	ENSMUSG00000049517	10090	+	13:90923131-90924942	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000051955	243.768±101.25	46.148±6.52	759.284±273.24	334.905±197.12	186.405±72.88	273.131±50.84	100.537±13.40	236.827±15.80	520.106±473.63	253.492±37.01	126.043±33.41	320.613±90.33	437.035±270.25	164.288±34.15

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002ZT	CIL_0002ZT_0002	CGP	13:90883433-90924942
CIL_000922	CIL_000922_0002	VISTA	13:90886994-91490170

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003735	IEA	structural constituent of ribosome
GO:0005515	IEA	protein binding
GO:0005730	IEA	nucleolus
GO:0005737	IEA	cytoplasm
GO:0006412	IEA	translation
GO:0016020	IEA	membrane
GO:0022627	IEA	cytosolic small ribosomal subunit
GO:0044822	IEA	poly(A) RNA binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000296674	RPS23-001	protein_coding	Homo_sapiens	0	630
ENST00000429775	RPS23P8-001	processed_pseudogene	Homo_sapiens	0	411
ENST00000466210	RPS23P7-001	processed_pseudogene	Homo_sapiens	0	416
ENST00000503605	RPS23-003	processed_transcript	Homo_sapiens	0	486
ENST00000504293	RPS23-004	retained_intron	Homo_sapiens	0	566
ENST00000507980	RPS23-006	protein_coding	Homo_sapiens	0	261
ENST00000508814	ATG10-010	processed_transcript	Homo_sapiens	9.94922e-44	180
ENST00000510210	RPS23-008	protein_coding	Homo_sapiens	0	483
ENST00000512493	RPS23-007	protein_coding	Homo_sapiens	0	484
ENST00000514253	ATG10-009	processed_transcript	Homo_sapiens	2.99878e-43	180

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