C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S23 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466210 RPS23P7-001 ENSG00000239527 9606 + 17:62397397-62398142 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLungMuscleTestisENST00000466210
Transcript ID Adrenal Colon Lung Muscle Testis
ENST00000466210 0.063±0.00 0.029±0.00 0.029±0.00 0.056±0.00 0.073±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ZX CIL_0006ZX_0001 CGP 17:62370218-62450822

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051955 Rps23-201 protein_coding Mus_musculus 0 416
ENSMUST00000146939 Rps23-ps2-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000098864 Gm10689-201 processed_pseudogene Mus_musculus 0 405
ENSMUST00000118718 Gm15464-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000116115 Rps23-ps-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000118083 Gm8624-001 transcribed_processed_pseudogene Mus_musculus 0 392
ENSMUST00000165677 Gm8624-002 processed_transcript Mus_musculus 0 392
ENSMUST00000077976 Rps23-ps1-201 pseudogene Mus_musculus 0 387
ENSMUST00000097570 Gm8618-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000121152 Gm14633-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000099128 Gm5148-003 protein_coding Mus_musculus 0 370
ENSMUST00000108105 Gm5148-002 protein_coding Mus_musculus 0 370
ENSMUST00000079755 Gm5148-001 protein_coding Mus_musculus 0 370
ENSMUST00000086479 C330021F23Rik-201 protein_coding Mus_musculus 0 359
ENSMUST00000151633 C330021F23Rik-002 protein_coding Mus_musculus 0 359
ENSMUST00000136592 C330021F23Rik-001 protein_coding Mus_musculus 0 359
ENSMUST00000079663 Gm2174-201 protein_coding Mus_musculus 0 331
ENSMUST00000161951 Gm16570-001 processed_pseudogene Mus_musculus 0 252

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