C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: filamin, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052678 Flnb-001 ENSMUSG00000025278 10090 + 14:7817957-7951588 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052678
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052678 11.631±5.41 5.251±2.12 14.655±1.27 5.602±0.67 7.185±2.66 13.819±8.50 3.298±0.85 6.733±4.27 2.732±2.87 8.845±2.06 1.135±0.80 14.666±8.31 44.057±26.51 1.957±1.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UM CIL_0002UM_0002 CGP 14:7817957-7994573

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005737 ISA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007519 IDA skeletal muscle tissue development
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295956 FLNB-001 protein_coding Homo_sapiens 0 9258
ENST00000325888 FLNC-001 protein_coding Homo_sapiens 0 702
ENST00000344736 FLNA-010 protein_coding Homo_sapiens 0 839
ENST00000346177 FLNC-002 protein_coding Homo_sapiens 0 702
ENST00000358537 FLNB-003 protein_coding Homo_sapiens 0 5860
ENST00000360319 FLNA-001 protein_coding Homo_sapiens 0 839
ENST00000369850 FLNA-002 protein_coding Homo_sapiens 0 839
ENST00000369856 FLNA-022 protein_coding Homo_sapiens 0 839
ENST00000420627 FLNA-021 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000422373 FLNA-201 protein_coding Homo_sapiens 0 839
ENST00000429972 FLNB-005 protein_coding Homo_sapiens 0 5921
ENST00000468939 FLNB-012 retained_intron Homo_sapiens 0 571
ENST00000475487 FLNB-013 retained_intron Homo_sapiens 0 425
ENST00000481470 FLNB-006 retained_intron Homo_sapiens 0 2754
ENST00000490882 FLNB-002 protein_coding Homo_sapiens 0 5116
ENST00000491408 FLNB-011 retained_intron Homo_sapiens 0 414
ENST00000493452 FLNB-009 protein_coding Homo_sapiens 0 5110
ENST00000552112 RP11-1100L3.4-001 processed_pseudogene Homo_sapiens 0 852
ENST00000610817 FLNA-202 protein_coding Homo_sapiens 0 839

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