C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: filamin A, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369856 FLNA-022 ENSG00000196924 9606 - X:154348529-154371222 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverLungOvaryPlacentaENST00000369856
Transcript ID Brain Breast Kidney Liver Lung Ovary Placenta
ENST00000369856 3.692±2.43 79.678±0.00 2.161±0.00 7.196±0.00 55.695±36.36 71.070±45.02 70.139±9.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L8 CIL_0001L8_0001 CGP X:154295671-154374638
CIL_0001L9 CIL_0001L9_0001 CGP X:154348524-154381523

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033699 Flna-003 protein_coding Mus_musculus 0 9123
ENSMUST00000144429 Flna-001 nonsense_mediated_decay Mus_musculus 0 9105
ENSMUST00000101454 Flna-201 protein_coding Mus_musculus 0 8973
ENSMUST00000114299 Flna-002 protein_coding Mus_musculus 0 8973
ENSMUST00000130007 Flna-013 protein_coding Mus_musculus 0 5749
ENSMUST00000090474 Flnc-201 protein_coding Mus_musculus 0 2318
ENSMUST00000065090 Flnc-002 protein_coding Mus_musculus 0 2318
ENSDART00000135820 flna-001 protein_coding Danio_rerio 0 2054
ENSDART00000073442 flna-201 protein_coding Danio_rerio 0 2041
ENSMUST00000101617 Flnc-001 protein_coding Mus_musculus 0 2010
ENSMUST00000052678 Flnb-001 protein_coding Mus_musculus 0 839
ENSMUST00000156766 Flna-016 processed_transcript Mus_musculus 0 811
ENSMUST00000141528 Flna-011 retained_intron Mus_musculus 0 787
ENSMUST00000150554 Flna-015 protein_coding Mus_musculus 0 651
ENSMUST00000127463 Flna-014 protein_coding Mus_musculus 0 601
ENSDART00000026492 flncb-201 protein_coding Danio_rerio 0 503
ENSDART00000134286 flncb-001 protein_coding Danio_rerio 0 503
ENSMUST00000124950 Flna-006 retained_intron Mus_musculus 0 496
ENSMUST00000133609 Flna-010 retained_intron Mus_musculus 0 477

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