C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10254
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052888 Gm10254-201 ENSMUSG00000069011 10090 - 3:54810564-54811250 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052888 6.319±1.58 1.814±0.48 1.283±0.41 3.185±1.54 3.460±0.97 2.937±1.05 1.760±0.37 2.841±0.47 2.422±1.59 3.231±0.15 0.347±0.14 7.918±3.52 0.988±1.05 5.742±0.33

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259043 TRA2B-014 protein_coding Homo_sapiens 0 364
ENST00000342294 TRA2B-017 protein_coding Homo_sapiens 0.0000000002 69
ENST00000382191 TRA2B-008 protein_coding Homo_sapiens 0 695
ENST00000453386 TRA2B-001 protein_coding Homo_sapiens 0 963
ENST00000456380 TRA2B-003 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000463328 TRA2B-006 retained_intron Homo_sapiens 0 494
ENST00000465245 TRA2B-010 processed_transcript Homo_sapiens 0 431
ENST00000466832 TRA2B-007 retained_intron Homo_sapiens 0 204
ENST00000477939 TRA2B-013 retained_intron Homo_sapiens 0 407
ENST00000480461 TRA2B-009 retained_intron Homo_sapiens 0.0000000003 69
ENST00000485530 TRA2B-011 retained_intron Homo_sapiens 0 473
ENST00000487615 TRA2B-004 retained_intron Homo_sapiens 0 896
ENST00000492417 TRA2B-005 retained_intron Homo_sapiens 0 898
ENST00000493864 TRA2B-015 retained_intron Homo_sapiens 0 409

Loading