C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transformer 2 beta homolog (Drosophila) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000477939  |
TRA2B-013 |
ENSG00000136527 |
9606 | - |
3:185925273-185931618  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008ZT | CIL_0008ZT_0001 | VISTA | 3:185444884-186046681 |
| CIL_0003YC | CIL_0003YC_0002 | CGP | 3:185643739-185938136 |
| CIL_0006RI | CIL_0006RI_0001 | CGP | 3:185915906-186110318 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000162413
|
Tra2b-003 | nonsense_mediated_decay | Mus_musculus | 0 | 484 |
|
ENSMUST00000052888
|
Gm10254-201 | processed_pseudogene | Mus_musculus | 0 | 407 |
|
ENSMUST00000023564
|
Tra2b-006 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000161286
|
Tra2b-001 | protein_coding | Mus_musculus | 0 | 407 |
|
ENSMUST00000120850
|
Gm14639-001 | processed_pseudogene | Mus_musculus | 0 | 355 |
|
ENSMUST00000159946
|
Tra2b-004 | processed_transcript | Mus_musculus | 0 | 259 |
|
ENSMUST00000118304
|
Gm11957-001 | processed_pseudogene | Mus_musculus | 0 | 200 |
|
ENSMUST00000118107
|
Gm15667-001 | processed_pseudogene | Mus_musculus | 1.99965e-42 | 176 |
|
ENSMUST00000160579
|
Tra2b-002 | retained_intron | Mus_musculus | 0.0000000000002 | 81 |
