C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related subfamily, member 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000055064 Kcna10-001 ENSMUSG00000042861 10090 + 3:107183056-107195721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastMuscleTestisENSMUST00000055064
Transcript ID Bladder Brain Breast Muscle Testis
ENSMUST00000055064 0.006±0.00 0.012±0.00 0.019±0.00 0.035±0.02 0.043±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005E4 CIL_0005E4_0002 CGP 3:107101567-107195721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0008076 IEA voltage-gated potassium channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109628 KCNA3 (2 of 2)-201 protein_coding Danio_rerio 0 353
ENST00000252321 KCNA5-001 protein_coding Homo_sapiens 0 388
ENST00000280684 KCNA6-001 protein_coding Homo_sapiens 0 368
ENST00000328224 KCNA4-001 protein_coding Homo_sapiens 0 298
ENST00000369771 KCNA10-001 protein_coding Homo_sapiens 0 1919
ENST00000369787 KCNC4-004 protein_coding Homo_sapiens 0.000000000006 81
ENST00000376959 KCNC3-002 protein_coding Homo_sapiens 0.000000004 69
ENST00000413138 KCNC4-006 protein_coding Homo_sapiens 0.0000000000009 81
ENST00000433855 GALNT8-201 protein_coding Homo_sapiens 0 368
ENST00000438661 KCNC4-003 protein_coding Homo_sapiens 0.0000000000009 81
ENST00000459877 KCNC4-002 retained_intron Homo_sapiens 0.000000000002 81
ENST00000469655 KCNC4-001 nonsense_mediated_decay Homo_sapiens 0.000000000001 81
ENST00000477616 KCNC3-005 protein_coding Homo_sapiens 0.000000002 69
ENST00000489935 KCNC4-005 retained_intron Homo_sapiens 0.0000000000006 81

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