C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 5341
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058881 Gm5341-201 ENSMUSG00000062235 10090 - 7:90107477-90107968 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000058881
Transcript ID Brain Colon Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000058881 0.059±0.00 0.372±0.14 0.094±0.00 0.097±0.00 0.080±0.07 0.125±0.00 0.093±0.00 0.112±0.00 0.060±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335895 BTF3-001 protein_coding Homo_sapiens 0 601
ENST00000380591 BTF3-002 protein_coding Homo_sapiens 0 601
ENST00000407097 BTF3P7-001 processed_pseudogene Homo_sapiens 0 457
ENST00000418852 BTF3P4-001 processed_pseudogene Homo_sapiens 0 529
ENST00000457252 BTF3P5-001 processed_pseudogene Homo_sapiens 0 466
ENST00000507081 BTF3-009 protein_coding Homo_sapiens 2e-25 119
ENST00000508901 BTF3-007 retained_intron Homo_sapiens 0 556
ENST00000510787 BTF3-005 retained_intron Homo_sapiens 0 265
ENST00000512257 BTF3-003 retained_intron Homo_sapiens 6e-25 119
ENST00000513224 BTF3P13-001 processed_pseudogene Homo_sapiens 0 466
ENST00000514360 BTF3-008 retained_intron Homo_sapiens 0 265
ENST00000519620 BTF3P12-001 processed_pseudogene Homo_sapiens 0 379
ENST00000519706 RP11-382J24.2-001 processed_pseudogene Homo_sapiens 0 372

Loading