C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3 pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000407097 BTF3P7-001 ENSG00000219986 9606 - 6:6794915-6795402 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLungMuscleOvaryENST00000407097
Transcript ID Bladder Brain Breast Colon Lung Muscle Ovary
ENST00000407097 0.589±0.00 0.028±0.00 0.054±0.00 0.026±0.00 0.051±0.00 0.024±0.00 0.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003S8 CIL_0003S8_0001 CGP 6:6588108-7251980

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 608
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 608
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 608
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000139070 Gm7613-001 processed_pseudogene Mus_musculus 0 569
ENSMUST00000122107 Gm7973-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000058881 Gm5341-201 processed_pseudogene Mus_musculus 0 457
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 448
ENSMUST00000117114 Gm12142-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000121630 Gm11931-001 processed_pseudogene Mus_musculus 0 340

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