C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: basic transcription factor 3 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519620 BTF3P12-001 ENSG00000213003 9606 + 8:70273369-70273837 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLiverMuscleOvaryPlacentaTestisENST00000519620
Transcript ID Adipose Adrenal Breast Kidney Liver Muscle Ovary Placenta Testis
ENST00000519620 0.221±0.00 0.175±0.00 0.303±0.27 1.005±0.86 0.076±0.00 0.025±0.00 0.252±0.00 0.111±0.00 0.053±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003BO CIL_0003BO_0001 CGP 8:70051651-70403805
CIL_0003BN CIL_0003BN_0001 CGP 8:70109762-70608387

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152704 Btf3-002 protein_coding Mus_musculus 0 553
ENSMUST00000134542 Btf3-003 protein_coding Mus_musculus 0 547
ENSMUST00000022163 Btf3-001 protein_coding Mus_musculus 0 547
ENSMUST00000162698 Gm3531-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000133826 Btf3-004 retained_intron Mus_musculus 0 409
ENSMUST00000058881 Gm5341-201 processed_pseudogene Mus_musculus 0 379
ENSMUST00000121630 Gm11931-001 processed_pseudogene Mus_musculus 0 278

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