C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: choline phosphotransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000073783 Chpt1-006 ENSMUSG00000060002 10090 - 10:88487042-88503925 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000073783
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000073783 214.628±124.82 275.700±152.19 203.537±50.90 42.904±6.62 64.065±27.68 190.713±45.09 23.040±10.48 40.404±13.28 51.136±8.27 18.878±3.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078K CIL_00078K_0002 CGP 10:88379132-88504073
CIL_0002S4 CIL_0002S4_0002 CGP 10:88452745-88504073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004142 ISS diacylglycerol cholinephosphotransferase activity
GO:0005794 IDA Golgi apparatus
GO:0006656 ISS phosphatidylcholine biosynthetic process
GO:0006657 IEA CDP-choline pathway
GO:0006663 ISS platelet activating factor biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016780 IDA phosphotransferase activity, for other substituted phosphate groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229266 CHPT1-001 protein_coding Homo_sapiens 0 686
ENST00000546490 CHPT1-007 retained_intron Homo_sapiens 0 510
ENST00000549128 CHPT1-004 nonsense_mediated_decay Homo_sapiens 0 686
ENST00000549872 CHPT1-002 protein_coding Homo_sapiens 0 686
ENST00000550385 CHPT1-006 processed_transcript Homo_sapiens 0 348
ENST00000552215 CHPT1-005 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000552351 CHPT1-003 nonsense_mediated_decay Homo_sapiens 0 686

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