C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5121
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085711 Gm5121-201 ENSMUSG00000066626 10090 + 9:57334128-57334754 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000085711
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000085711 0.164±0.05 0.055±0.02 0.103±0.06 0.229±0.00 0.271±0.12 0.100±0.03 0.069±0.00 0.073±0.06 0.199±0.08 0.128±0.12 0.117±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A3 CIL_0002A3_0002 CGP 9:57252322-57440114

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372209 RPS8-003 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000396651 RPS8-001 protein_coding Homo_sapiens 0 739
ENST00000415328 RP11-229A12.2-001 processed_pseudogene Homo_sapiens 0 551
ENST00000426177 RPS8P6-001 processed_pseudogene Homo_sapiens 3.00004e-41 172
ENST00000462935 RPS8P3-001 processed_pseudogene Homo_sapiens 0 573
ENST00000470475 RPS8-005 processed_transcript Homo_sapiens 0 255
ENST00000484005 RP11-252I14.1-001 processed_pseudogene Homo_sapiens 0 390
ENST00000485390 RPS8-004 processed_transcript Homo_sapiens 0 734
ENST00000497035 RPS8-002 processed_transcript Homo_sapiens 0 588

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