C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 2, subfamily c, polypeptide 66
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087234 Cyp2c66-001 ENSMUSG00000067229 10090 + 19:39113898-39186756 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLungTestisENSMUST00000087234
Transcript ID Brain Colon Lung Testis
ENSMUST00000087234 0.002±0.00 0.333±0.13 0.102±0.00 0.132±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007H6 CIL_0007H6_000T CGP 19:39061015-39187072
CIL_0007H6 CIL_0007H6_000S CGP 19:39113898-39330713

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002244 IGI hematopoietic progenitor cell differentiation
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260682 CYP2C9-001 protein_coding Homo_sapiens 0 1157
ENST00000285979 CYP2C18-001 protein_coding Homo_sapiens 0 1120
ENST00000371270 CYP2C8-001 protein_coding Homo_sapiens 0 1000
ENST00000371321 CYP2C19-001 protein_coding Homo_sapiens 0 1138
ENST00000461906 CYP2C9-002 processed_transcript Homo_sapiens 0 377
ENST00000464755 RP11-400G3.5-001 nonsense_mediated_decay Homo_sapiens 0 1042
ENST00000473496 CYP2C9-003 processed_transcript Homo_sapiens 0 486
ENST00000479946 CYP2C8-002 retained_intron Homo_sapiens 0 608
ENST00000480405 CYP2C19-003 protein_coding Homo_sapiens 0 353
ENST00000490994 CYP2C8-008 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000525991 CYP2C8-007 nonsense_mediated_decay Homo_sapiens 0 833
ENST00000526814 CYP2C8-005 retained_intron Homo_sapiens 0 833
ENST00000527420 CYP2C8-003 nonsense_mediated_decay Homo_sapiens 0 774
ENST00000527953 CYP2C8-006 retained_intron Homo_sapiens 0 608
ENST00000533320 CYP2C8-004 retained_intron Homo_sapiens 0 833
ENST00000535898 CYP2C8-201 protein_coding Homo_sapiens 0 833
ENST00000539050 CYP2C8-202 protein_coding Homo_sapiens 0 896
ENST00000623108 CYP2C8-203 protein_coding Homo_sapiens 0 896

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