C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy chain 9, non-muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000216181 MYH9-001 ENSG00000100345 9606 - 22:36281281-36388018 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000216181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000216181 236.287±0.00 150.748±0.00 16.081±0.00 21.320±20.10 81.838±51.65 70.697±49.54 23.752±21.47 43.367±34.31 17.012±6.73 187.064±169.04 21.801±15.56 65.410±55.06 99.490±5.46 54.058±51.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GV CIL_0003GV_0001 CGP 22:36253010-36388018
CIL_0006EZ CIL_0006EZ_0002 CGP 22:36281281-36482030

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IDA microfilament motor activity
GO:0000166 IEA nucleotide binding
GO:0000212 IEA meiotic spindle organization
GO:0000904 IEA cell morphogenesis involved in differentiation
GO:0000910 IMP cytokinesis
GO:0001525 IDA angiogenesis
GO:0001701 IEA in utero embryonic development
GO:0001725 IDA stress fiber
GO:0001726 IDA ruffle
GO:0001768 IEA establishment of T cell polarity
GO:0001772 IDA immunological synapse
GO:0001931 IDA uropod
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003774 IEA:NAS motor activity
GO:0003779 IDA actin binding
GO:0004871 IEA signal transducer activity
GO:0005515 IPI:IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA:IDA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IEA spindle
GO:0005826 IDA actomyosin contractile ring
GO:0005829 IDA cytosol
GO:0005886 IDA plasma membrane
GO:0005913 IEA cell-cell adherens junction
GO:0005938 IEA cell cortex
GO:0006200 IDA ATP catabolic process
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006509 IDA membrane protein ectodomain proteolysis
GO:0006928 IEA cellular component movement
GO:0007155 IEA cell adhesion
GO:0007165 IEA signal transduction
GO:0007229 NAS integrin-mediated signaling pathway
GO:0007411 TAS axon guidance
GO:0007520 IEA myoblast fusion
GO:0008152 IEA metabolic process
GO:0008180 IDA COP9 signalosome
GO:0008305 IDA integrin complex
GO:0008360 IMP regulation of cell shape
GO:0015031 IMP protein transport
GO:0015629 IDA actin cytoskeleton
GO:0016020 IDA membrane
GO:0016337 IEA single organismal cell-cell adhesion
GO:0016459 IEA myosin complex
GO:0016460 IDA myosin II complex
GO:0016887 IDA ATPase activity
GO:0030048 IDA actin filament-based movement
GO:0030220 IMP platelet formation
GO:0030224 IEP monocyte differentiation
GO:0030863 IEA cortical cytoskeleton
GO:0030898 IDA actin-dependent ATPase activity
GO:0031032 IDA actomyosin structure organization
GO:0031252 IDA cell leading edge
GO:0031532 IMP actin cytoskeleton reorganization
GO:0031594 IEA neuromuscular junction
GO:0032154 IDA cleavage furrow
GO:0032796 IEA uropod organization
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0042641 IDA actomyosin
GO:0042803 IDA protein homodimerization activity
GO:0043234 IDA protein complex
GO:0043495 IMP protein anchor
GO:0043531 IDA ADP binding
GO:0043534 IMP blood vessel endothelial cell migration
GO:0044822 IDA poly(A) RNA binding
GO:0050900 NAS leukocyte migration
GO:0051015 IEA:IDA actin filament binding
GO:0051295 IEA establishment of meiotic spindle localization
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 IMP platelet aggregation
GO:0097513 IDA myosin II filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016771 Myh9-001 protein_coding Mus_musculus 0 8063
ENSDART00000137105 myh9b-001 protein_coding Danio_rerio 0 3642
ENSMUST00000090287 Myh11-201 protein_coding Mus_musculus 0 3147
ENSMUST00000092984 Myh10-008 protein_coding Mus_musculus 0 2881
ENSMUST00000102611 Myh10-001 protein_coding Mus_musculus 0 2881
ENSDART00000092373 myh9b-201 protein_coding Danio_rerio 0 2800
ENSDART00000150939 myh10-002 protein_coding Danio_rerio 0 2543
ENSDART00000046359 myh10-201 protein_coding Danio_rerio 0 2536
ENSDART00000151114 myh10-001 protein_coding Danio_rerio 0 2536
ENSDART00000105232 myh9a-202 protein_coding Danio_rerio 0 2416
ENSDART00000149823 myh9a-001 protein_coding Danio_rerio 0 2392
ENSDART00000011353 myh9a-201 protein_coding Danio_rerio 0 1711
ENSMUST00000126796 Myh9-004 retained_intron Mus_musculus 0 1666
ENSDART00000041142 myh11a-001 protein_coding Danio_rerio 0 1543
ENSMUST00000107899 Myh14-002 protein_coding Mus_musculus 0 1495
ENSMUST00000107900 Myh14-201 protein_coding Mus_musculus 0 1251
ENSMUST00000048102 Myh14-001 protein_coding Mus_musculus 0 1249
ENSMUST00000129453 Myh9-002 retained_intron Mus_musculus 0 1243
ENSMUST00000182648 Myh14-007 protein_coding Mus_musculus 0 1003
ENSMUST00000134878 Myh9-003 retained_intron Mus_musculus 0 891
ENSMUST00000123101 Myh9-006 nonsense_mediated_decay Mus_musculus 0 865
ENSMUST00000155765 Myh10-010 retained_intron Mus_musculus 0 861
ENSMUST00000124844 Myh9-005 processed_transcript Mus_musculus 0 852
ENSMUST00000018887 Myh10-002 protein_coding Mus_musculus 0 793
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 0 490
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 0 490
ENSMUST00000139729 Myh9-007 retained_intron Mus_musculus 0 484
ENSDART00000138858 myh11a-002 protein_coding Danio_rerio 0 259
ENSDART00000109515 myo7bb-201 protein_coding Danio_rerio 0.000000005 69
ENSDART00000141621 myo7bb-001 protein_coding Danio_rerio 0.000000005 69

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