C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myosin, heavy chain 11, smooth muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000576164 MYH11-009 ENSG00000133392 9606 - 16:15712890-15724328 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UO CIL_0006UO_0001 CGP 16:15594386-15726353
CIL_0006MU CIL_0006MU_0001 CGP 16:15643267-15857033
CIL_0002TD CIL_0002TD_0001 CGP 16:15703135-15888625

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090287 Myh11-201 protein_coding Mus_musculus 0 636
ENSMUST00000016771 Myh9-001 protein_coding Mus_musculus 1e-18 100
ENSMUST00000107900 Myh14-201 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000182648 Myh14-007 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000125870 Myh14-003 processed_transcript Mus_musculus 0.00000000000004 86
ENSMUST00000048102 Myh14-001 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000107899 Myh14-002 protein_coding Mus_musculus 0.00000000000004 86
ENSMUST00000189018 Ccdc86-003 retained_intron Mus_musculus 0.000000000002 81
ENSMUST00000169308 0610011F06Rik-006 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000110456 0610011F06Rik-005 nonsense_mediated_decay Mus_musculus 0.00000001 68
ENSMUST00000036872 Wipi2-001 protein_coding Mus_musculus 0.0004 53

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