C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cortactin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090601 Cttnbp2-003 ENSMUSG00000000416 10090 - 6:18366547-18514869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090601 0.975±0.76 5.935±1.15 0.548±0.18 3.012±0.08 0.393±0.06 1.625±0.30 0.142±0.01 1.569±0.26 0.128±0.08 1.607±0.12 0.022±0.00 0.786±0.29 0.154±0.06 0.265±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005U6 CIL_0005U6_0003 CGP 6:18170687-18514869
CIL_0003QX CIL_0003QX_0002 CGP 6:18366478-18855751

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007420 IEA brain development
GO:0008021 IEA synaptic vesicle
GO:0017124 IEA SH3 domain binding
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000160373 CTTNBP2-001 protein_coding Homo_sapiens 0 5877
ENST00000412853 CTTNBP2-007 protein_coding Homo_sapiens 0 418
ENST00000416239 CTTNBP2-004 protein_coding Homo_sapiens 0 326
ENST00000434890 CTTNBP2-002 protein_coding Homo_sapiens 0 643
ENST00000435233 CTTNBP2-009 protein_coding Homo_sapiens 0 388
ENST00000441556 CTTNBP2-012 nonsense_mediated_decay Homo_sapiens 0 3598
ENST00000445366 CTTNBP2-010 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000446636 CTTNBP2-011 protein_coding Homo_sapiens 0 3663
ENST00000454375 CTTNBP2-006 protein_coding Homo_sapiens 0 562
ENST00000467088 CTTNBP2-008 retained_intron Homo_sapiens 0 496

Loading