C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103131 Krt10-001 ENSMUSG00000019761 10090 - 11:99385254-99389364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000103131
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000103131 0.459±0.03 1.167±0.45 2.237±0.41 5.803±2.47 9.551±7.10 0.350±0.15 0.274±0.00 1.288±0.42 0.385±0.10 1.939±1.70 1.493±0.63 0.934±1.35 0.625±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0018 CGP 11:99364872-99389364
CIL_00056U CIL_00056U_000T CGP 11:99385254-99422259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0016020 IEA membrane
GO:0030216 IEA keratinocyte differentiation
GO:0030855 IDA epithelial cell differentiation
GO:0045095 IDA keratin filament
GO:0070062 IEA extracellular vesicular exosome
GO:0071277 IDA cellular response to calcium ion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225899 KRT32-001 protein_coding Homo_sapiens 9e-21 106
ENST00000246635 KRT13-001 protein_coding Homo_sapiens 0 278
ENST00000269576 KRT10-002 protein_coding Homo_sapiens 0 1605
ENST00000311208 KRT17-001 protein_coding Homo_sapiens 0 315
ENST00000336861 KRT13-002 protein_coding Homo_sapiens 0 278
ENST00000463128 KRT17-002 protein_coding Homo_sapiens 0 252
ENST00000464634 KRT13-006 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000468313 KRT13-003 retained_intron Homo_sapiens 0 265
ENST00000493253 KRT17-003 retained_intron Homo_sapiens 0 265
ENST00000540235 KRT17-201 protein_coding Homo_sapiens 0 267
ENST00000587544 KRT13-005 protein_coding Homo_sapiens 0 278
ENST00000590038 KRT17-006 protein_coding Homo_sapiens 0 206
ENST00000590425 KRT13-007 protein_coding Homo_sapiens 0 263

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